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XClone
PublicDetection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.cellsnp-lite
PublicEfficient genotyping bi-allelic SNPs on single cellslimix_qtl
Publicvireo
PublicDemultiplexing pooled scRNA-seq data with or without genotype referenceMQuad
PublicTool for modelling of mitochondrial heteroplasmysinglecell_neuroseq_paper
Public template- Repository containing the code to reproduce the analyses contained in our manuscript: Optimising expression quantitative trait locus mapping workflows for singl…
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
cardelino
PublicClone identification from single-cell datacellSNP
PublicPileup biallelic SNPs from single-cell and bulk RNA-seq data
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