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5 repositories

peakMerge
Public
Merge multiple peak calling experiments into consensus peaks and a sparse consensus by sample matrix (part of MUFFIN suite).
python bioinformatics genomics
python bioinformatics genomics scipy chip-seq atac-seq functional-genomics peak-calling consensus-peaks narrowpeak
Python
•0•2•0•0•Updated Dec 20, 2025Dec 20, 2025
remap-pipeline
Public
As the ReMap project expands dramatically and regulatory catalogs for other species are requested, it becomes essential to enable joint efforts between the ReMa…
Python
•6•8•2•0•Updated Jun 23, 2025Jun 23, 2025
ReMapEnrich
Public
ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions t…
r chip-seq r-package
r chip-seq r-package transcription-factor-binding enrichment-analysis genomic-regions
HTML
•5•17•10•1•Updated Feb 2, 2022Feb 2, 2022
remap-rest
Public
Language agnostic RESTful data access to ReMap data over HTTP
mongodb chip-seq
mongodb chip-seq
Shell
•1•1•0•0•Updated Mar 30, 2021Mar 30, 2021
remap-docker-images
Public
Repository for docker images that are hosted on docker hub
0•1•0•0•Updated May 15, 2019May 15, 2019

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