Skip to content

@connectomicslab Connectomics Lab

Change the repository type filter

All

    Repositories list

    16 repositories

    • clabtoolkit

      Public
      This repository contains a comprehensive Python toolkit that consolidates essential neuroimaging operations: parcellation manipulation, surface analysis, tracto…
      Python
      •
      Other
      •3•2•1•0•Updated Apr 24, 2026Apr 24, 2026

    • chimera

      Public
      Python
      •
      Other
      •1•7•1•0•Updated Apr 24, 2026Apr 24, 2026

    • connectomemapper3

      Public
      Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 /…
      pythondockerpipelines
      pythondockerpipelinessingularityeegfmribidsbrainconnectomeparcellation
      HTML
      •
      Other
      •31•83•20•3•Updated Mar 20, 2026Mar 20, 2026

    • probconnatlas

      Public
      Python
      •
      Apache License 2.0
      •2•13•0•0•Updated Apr 14, 2025Apr 14, 2025

    • AI-Assisted-Aneurysm-Detection

      Public
      This repository contains the code used for the paper "Assessing workflow impact and clinical utility of AI-assisted brain aneurysm detection: a multi-reader stu…
      Python
      •
      Apache License 2.0
      •0•2•0•0•Updated Mar 22, 2025Mar 22, 2025

    • indivbrainparcel

      Public
      Python package to parcellate the human brain using the Lausanne multi-scale cortical atlas and the thalamic nuclei atlas developed in the Connectomics and MIAL …
      Python
      •
      Other
      •1•1•0•0•Updated Aug 19, 2024Aug 19, 2024

    • hcp-behavioral-domains

      Public
      This is the repository to store the analysis code for the paper "Exploring the Latent Structure of Behavior Using the Human Connectome Project’s Data".
      Jupyter Notebook
      •
      MIT License
      •3•5•0•1•Updated Jul 11, 2023Jul 11, 2023

    • Glioma_Change_Detection_T2w

      Public
      Python
      •
      Apache License 2.0
      •1•0•0•0•Updated Feb 14, 2023Feb 14, 2023

    • Aneurysm_Detection

      Public
      This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and anatomical knowledge "
      deep-learningdetectionsegmentation
      deep-learningdetectionsegmentationweakly-supervised-detectionaneurysmtof-mraanatomical-knowledge
      Python
      •
      Apache License 2.0
      •16•38•4•0•Updated Feb 14, 2023Feb 14, 2023

    • connectome_spectral_analysis

      Public
      Repository for paper https://authors.elsevier.com/sd/article/S1053-8119(21)00884-3
      Jupyter Notebook
      •5•1•0•0•Updated Sep 24, 2021Sep 24, 2021

    • Glioma_NLP

      Public
      This repository contains the code used for the paper:"Diagnostic surveillance of high-grade gliomas: towards automated change detection using radiology report c…
      Python
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 19, 2021Aug 19, 2021

    • ds-sample-test2

      Public
      0•0•0•0•Updated Jul 16, 2021Jul 16, 2021

    • ds-sample-test1

      Public
      0•0•0•0•Updated Jul 15, 2021Jul 15, 2021

    • CMTKLIB-data

      Public
      Datalad dataset that stores all data resources of the cmtklib module of Connectome Mapper 3 (https://github.com/connectomicslab/connectomemapper3).
      dataresourcessoftware
      dataresourcessoftwarebrainparcellation
      Python
      •
      Creative Commons Attribution 4.0 International
      •0•1•0•0•Updated Mar 10, 2021Mar 10, 2021

    • cmp3-ohbm2020

      Public
      Repo dedicated to resources for presenting connectome mapper 3 at OHBM 2020 Virtual Meeting
      HTML
      •1•0•0•0•Updated Jun 15, 2020Jun 15, 2020

    • hcp2bids

      Public
      To convert Human Connectome projects(HCP) data to BIDS std
      Python
      •
      MIT License
      •23•1•0•0•Updated Mar 21, 2019Mar 21, 2019
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.