Bump to NumPy 2.x #667

	name: Python package

	on:
	push:
	branches: [ "main" ]
	pull_request:
	branches: [ "main" ]

	jobs:
	build:
	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	# 3.13 is now available and worth testing for NumPy 2.0+
	python-version: ["3.10", "3.11", "3.12", "3.13"]

	steps:
	- uses: actions/checkout@v4

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}
	cache: 'pip' # Automatically caches your dependencies

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install flake8 pytest pytest-cov

	# Install requirements first
	if [ -f requirements.txt ]; then pip install -r requirements.txt; fi

	# Install remaining packages without --user
	pip install pyyaml TextGrid mne-bids

	# Final sanity check to ensure NumPy 2.0 didn't get downgraded
	python -c "import numpy; print(f'Using NumPy {numpy.__version__}')"

	- name: Lint with flake8
	run: \|
	flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
	flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics

	- name: Test with pytest and get coverage
	run: \|
	# Using -v helps identify exactly which test crashes if collection fails
	pytest -v tests/ --cov=./naplib/ --cov-report=xml

	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v4 # Updated to v4
	with:
	token: ${{ secrets.CODECOV_TOKEN }} # v4 often requires a token

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