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Update_NPT_NP_dynamics_and_add_NPH_full_cell_flexibility #184

Update_NPT_NP_dynamics_and_add_NPH_full_cell_flexibility

Update_NPT_NP_dynamics_and_add_NPH_full_cell_flexibility #184

Workflow file for this run

name: Build SPARC using conda-build toolchains and perform quick test (no upload)
on:
push:
branches:
- master
pull_request:
branches:
- master
workflow_dispatch:
jobs:
# Check if initialization.c is up-to-date with Changelog
package-date-check:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
python-version: "3.12"
activate-environment: sparc-test
miniforge-version: latest # Fix according to https://github.com/conda-incubator/setup-miniconda?tab=readme-ov-file#example-10-miniforge
channels: conda-forge,defaults
channel-priority: true
- name: Install SPARC-X-API stable version for docparser
run: |
mamba install -c conda-forge pip setuptools
pip install git+https://github.com/SPARC-X/SPARC-X-API.git@v1.1.0
- name: Convert parameters.json
run: |
python -m sparc.docparser --include-subdirs doc/.LaTeX
- name: Check package version and ChangeLog date
run: |
# Usage:
# python test-outdated-package.py <parameters.json> <changelog>
python .github/workflows/test-outdated-package.py \
./parameters.json ChangeLog
build-linux:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0}
needs: package-date-check
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
python-version: "3.12"
activate-environment: sparc-test
miniforge-version: latest # Fix according to https://github.com/conda-incubator/setup-miniconda?tab=readme-ov-file#example-10-miniforge
channels: conda-forge,defaults
channel-priority: true
- name: Install lasted conda build
# Conda build seems much stable now to be used without boa
run: |
mamba install -c conda-forge conda-build
- name: Build with mambabuild
run: |
echo $CONDA_PREFIX
conda info
CPU_COUNT=2 conda build .conda/
- name: Install local build
run: |
# Change from version 2.3
mamba install -c local sparc
which sparc
ldd $(which sparc)
ldd $(which mpirun)
- name: Test simple sparc run
run: |
cd tests/Cu_FCC/standard/
mpirun -n 2 sparc -name Cu_FCC
- name: Perform comprehensive tests using `quick_run`
run: |
cp $(which sparc) lib/
cd tests
export LD_LIBRARY_PATH=${CONDA_PREFIX}/lib:${LD_LIBRARY_PATH}
python SPARC_testing_script.py quick_run | tee output
n_failed=$(grep -o 'Tests failed: [0-9]\+' output | grep -o '[0-9]\+$')
# Force fail, see what happens
unset LD_LIBRARY_PATH
python -c "import os, re; match = re.findall(r'Tests failed: (\d+)', open('output').read()); [print('All pass'), os._exit(0)] if int(match[0]) == 0 else [print('Failed'), os._exit(1)]"
rm -rf output
- name: Test socket compatibility
run: |
mpirun -n 1 sparc | tee command-socket.out || true
# Output from the sparc test command
# should contain the -socket subcommand (use regex)
grep "\\-socket" command-socket.out