@@ -93,14 +93,6 @@ iBite.table <- left_join(iBite.table, HemiHolo.order.fit, by = "order") %>%
9393 " latitude" , " longitude" , " country" ) %> %
9494 arrange(HemiHolo , infraclass , cohort , order , suborder , superfamily , family , subfamily , tribe , genus , species )
9595
96- # get order, family, species, specimen and measurement (=iBite) numbers
97- length(unique(iBite.table $ order ))
98- length(unique(iBite.table $ family )) # (-1 because one family is unknown)
99- length(unique(iBite.table $ subfamily ))
100- length(unique(iBite.table $ genus ))
101- length(unique(iBite.table $ ID ))
102- length(unique(iBite.table $ specimen ))
103- length(unique(iBite.table $ iBite ))
10496
10597# raw data plotting
10698# load all raw measurements
@@ -928,4 +920,18 @@ iBite.table.reduced_iBite.save.zenodo <- iBite.table.reduced_iBite.save %>%
928920# write Zenodo overview to file
929921write_csv(iBite.table.reduced_iBite.save.zenodo , " ./iBite_table_for_zenodo_description.csv" )
930922
923+
924+ # get size range for main text
925+ range(iBite.table $ body.l )
931926print(" All finished!" )
927+
928+ # get coverage numbers for main text
929+
930+ # get order, family, species, specimen and measurement (=iBite) numbers
931+ print(paste0(" orders: " , length(unique(iBite.table $ order ))))
932+ print(paste0(" families: " , length(unique(iBite.table $ family ))))
933+ print(paste0(" subfamilies: " , length(unique(iBite.table $ subfamily ))))
934+ print(paste0(" genera: " , length(unique(iBite.table $ genus ))))
935+ print(paste0(" species: " , length(unique(iBite.table $ ID ))))
936+ print(paste0(" speciemens: " , length(unique(iBite.table $ specimen ))))
937+ print(paste0(" measurements: " , length(unique(iBite.table $ iBite ))))
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