Fix deadlock in error handling and inject default values that used to… #41
Workflow file for this run
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| name: Code coverage | |
| on: | |
| workflow_dispatch: | |
| push: | |
| jobs: | |
| coverage: | |
| name: Build and collect code coverage | |
| runs-on: ubuntu-latest | |
| env: | |
| BRANCH_NAME: ${{ github.head_ref || github.ref_name }} | |
| PKGS: > | |
| libxerces-c-dev xsdcxx libboost-program-options-dev libboost-filesystem-dev libboost-timer-dev libboost-date-time-dev libboost-chrono-dev libopenblas-dev liblapacke-dev gmt ghostscript lcov | |
| steps: | |
| - name: Install dependencies | |
| shell: bash | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y ${{ env.PKGS }} | |
| - uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ env.BRANCH_NAME }} | |
| - name: Build with CMake (coverage enabled) | |
| run: | | |
| cmake dynadjust -DBUILD_TESTING=ON -DBUILD_COVERAGE=ON | |
| make -j2 | |
| - name: Run tests | |
| run: | | |
| ctest --timeout 20 --output-on-failure 2>&1 | tee ctest_output.log | |
| - name: Capture coverage data | |
| if: always() | |
| run: | | |
| lcov --directory . --capture --output-file lcov.info --ignore-errors mismatch,negative | |
| lcov --remove lcov.info '/usr/*' '*/boost/*' '*/xerces*/*' '*/xsd/*' '*/testing/*' --output-file lcov.info --ignore-errors unused | |
| lcov --list lcov.info | |
| - name: Generate coverage summary | |
| if: always() | |
| id: coverage | |
| run: | | |
| # Extract total line coverage percentage | |
| TOTAL=$(lcov --summary lcov.info 2>&1 | grep 'lines' | sed 's/.*: //' | sed 's/%.*//') | |
| echo "total=${TOTAL}%" >> "$GITHUB_OUTPUT" | |
| # Build per-directory summary table | |
| { | |
| echo "## Code Coverage Report" | |
| echo "" | |
| echo "**Overall line coverage: ${TOTAL}%**" | |
| echo "" | |
| echo "| Directory | Line Coverage | Lines |" | |
| echo "|-----------|-------------|-------|" | |
| lcov --list lcov.info 2>&1 | grep '/' | grep -v '^\[' | while IFS='|' read -r file lines_pct func_pct branches; do | |
| dir=$(echo "$file" | xargs) | |
| pct=$(echo "$lines_pct" | xargs) | |
| echo "| \`${dir}\` | ${pct} |" | |
| done | |
| echo "" | |
| echo "*Generated from \`lcov\` — excludes system, Boost, Xerces, XSD, and test code.*" | |
| } > coverage_report.md | |
| - name: Post coverage comment on PR | |
| if: always() && github.event_name == 'pull_request' | |
| uses: marocchino/sticky-pull-request-comment@v2 | |
| with: | |
| path: coverage_report.md | |
| - name: Upload test log on failure | |
| if: failure() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: ctest-coverage-log | |
| path: Testing/Temporary/LastTest.log | |
| if-no-files-found: ignore | |
| - name: Parse test results and create annotations | |
| if: always() | |
| shell: bash | |
| run: | | |
| if [ -f ctest_output.log ]; then | |
| SUMMARY_LINE=$(grep -n "tests passed" ctest_output.log | head -1 | cut -d: -f1) | |
| if [ -n "$SUMMARY_LINE" ]; then | |
| FIRST_LINE=$(tail -n +$SUMMARY_LINE ctest_output.log | head -1) | |
| SUMMARY_CONTENT=$(tail -n +$SUMMARY_LINE ctest_output.log | grep -v "Errors while running" | tr '\n' '\a') | |
| SUMMARY_CONTENT=$(echo "$SUMMARY_CONTENT" | tr '\a' '\n' | sed ':a;N;$!ba;s/\n/%0A/g') | |
| if grep -q "tests failed" ctest_output.log; then | |
| echo "::error title=Test results (coverage): $FIRST_LINE::$SUMMARY_CONTENT" | |
| else | |
| echo "::notice title=Test results (coverage): $FIRST_LINE::$SUMMARY_CONTENT" | |
| fi | |
| else | |
| echo "::warning title=Test Warning::Could not find test summary in ctest output" | |
| fi | |
| else | |
| echo "::warning title=Test Warning::Could not find ctest output file" | |
| fi |