|
1 | | -"""PLOTS. |
| 1 | +"""PLOTS. |
2 | 2 |
|
3 | 3 | :Name: plots.py |
4 | 4 |
|
|
8 | 8 |
|
9 | 9 | """ |
10 | 10 |
|
| 11 | +from collections import Counter |
| 12 | + |
| 13 | +import healpy as hp |
| 14 | +import healsparse as hsp |
11 | 15 | import matplotlib |
12 | 16 | import matplotlib.pylab as plt |
13 | 17 | import matplotlib.ticker as ticker |
14 | 18 | import numpy as np |
| 19 | +import skyproj |
| 20 | +from astropy import units as u |
| 21 | +from astropy.coordinates import SkyCoord |
15 | 22 |
|
16 | 23 |
|
17 | 24 | def figure(figsize=(30, 30)): |
@@ -426,3 +433,316 @@ def log_ticks(x): |
426 | 433 | ticks.append(val) |
427 | 434 |
|
428 | 435 | return np.array(ticks) |
| 436 | + |
| 437 | + |
| 438 | +class FootprintPlotter: |
| 439 | + """Class to create footprint plots. |
| 440 | +
|
| 441 | + Parameters |
| 442 | + ----------- |
| 443 | + nside_coverage: int, optional |
| 444 | + basic resolution of map; default is 32 |
| 445 | + nside_map: |
| 446 | + fine resolution for plotting; default is 2048 |
| 447 | +
|
| 448 | + """ |
| 449 | + |
| 450 | + # Dictionary storing region parameters |
| 451 | + _regions = { |
| 452 | + "NGC": {"ra_0": 180, "extend": [120, 270, 20, 70], "vmax": 60}, |
| 453 | + "SGC": {"ra_0": 15, "extend": [-20, 45, 20, 45], "vmax": 60}, |
| 454 | + "fullsky": {"ra_0": 150, "extend": [0, 360, -90, 90], "vmax": 60}, |
| 455 | + } |
| 456 | + |
| 457 | + def __init__(self, nside_coverage=32, nside_map=2048): |
| 458 | + |
| 459 | + self._nside_coverage = nside_coverage |
| 460 | + self._nside_map = nside_map |
| 461 | + |
| 462 | + def create_hsp_map(self, ra, dec): |
| 463 | + """Create Hsp Map. |
| 464 | +
|
| 465 | + Create healsparse map. |
| 466 | +
|
| 467 | + Parameters |
| 468 | + ---------- |
| 469 | + ra : numpy.ndarray |
| 470 | + right ascension values |
| 471 | + dec : numpy.ndarray |
| 472 | + declination values |
| 473 | +
|
| 474 | + Returns |
| 475 | + ------- |
| 476 | + hsp.HealSparseMap |
| 477 | + map |
| 478 | +
|
| 479 | + """ |
| 480 | + # Create empty map |
| 481 | + hsp_map = hsp.HealSparseMap.make_empty( |
| 482 | + self._nside_coverage, self._nside_map, dtype=np.float32, sentinel=np.nan |
| 483 | + ) |
| 484 | + |
| 485 | + # Get pixel list corresponding to coordinates |
| 486 | + hpix = hp.ang2pix(self._nside_map, ra, dec, nest=True, lonlat=True) |
| 487 | + |
| 488 | + # Get count of objects per pixel |
| 489 | + pixel_counts = Counter(hpix) |
| 490 | + |
| 491 | + # List of unique pixels |
| 492 | + unique_hpix = np.array(list(pixel_counts.keys())) |
| 493 | + |
| 494 | + # Number of objects |
| 495 | + values = np.array(list(pixel_counts.values()), dtype=np.float32) |
| 496 | + |
| 497 | + # Create maps with numbers per pixel |
| 498 | + hsp_map[unique_hpix] = values |
| 499 | + |
| 500 | + return hsp_map |
| 501 | + |
| 502 | + def plot_area( |
| 503 | + self, |
| 504 | + hsp_map, |
| 505 | + ra_0=0, |
| 506 | + extend=[120, 270, 29, 70], |
| 507 | + vmax=60, |
| 508 | + projection=None, |
| 509 | + outpath=None, |
| 510 | + title=None, |
| 511 | + colorbar=True, |
| 512 | + colorbar_label="Coverage depth", |
| 513 | + ): |
| 514 | + """Plot Area. |
| 515 | +
|
| 516 | + Plot catalogue in an area on the sky. |
| 517 | +
|
| 518 | + Parameters |
| 519 | + ---------- |
| 520 | + hsp_map : hsp_HealSparseMap |
| 521 | + input map |
| 522 | + ra_0 : float, optional |
| 523 | + anchor point in R.A.; default is 0 |
| 524 | + extend : list, optional |
| 525 | + sky region, extend=[ra_low, ra_high, dec_low, dec_high]; |
| 526 | + default is [120, 270, 29, 70] |
| 527 | + vmax : float, optional |
| 528 | + maximum pixel value to plot with color; default is 60 |
| 529 | + projection : skyproj.McBrydeSkyproj |
| 530 | + if ``None`` (default), a new plot is created |
| 531 | + outpath : str, optional |
| 532 | + output path, default is ``None`` |
| 533 | + title : str, optional |
| 534 | + print title if not ``None`` (default) |
| 535 | + colorbar : bool, optional |
| 536 | + add colorbar; default is ``True`` |
| 537 | + colorbar_label : str, optional |
| 538 | + colorbar label; default is "Coverage depth" |
| 539 | +
|
| 540 | + Returns |
| 541 | + -------- |
| 542 | + skyproj.McBrydeSkyproj |
| 543 | + projection instance |
| 544 | + plt.axes.Axes |
| 545 | + axes instance |
| 546 | +
|
| 547 | + Raises |
| 548 | + ------ |
| 549 | + ValueError |
| 550 | + if no object found in region |
| 551 | +
|
| 552 | + """ |
| 553 | + if not projection: |
| 554 | + |
| 555 | + # Create new figure and axes |
| 556 | + fig, ax = plt.subplots(figsize=(10, 10)) |
| 557 | + |
| 558 | + # Create new projection |
| 559 | + projection = skyproj.McBrydeSkyproj( |
| 560 | + ax=ax, lon_0=ra_0, extent=extend, autorescale=True, vmax=vmax |
| 561 | + ) |
| 562 | + else: |
| 563 | + ax = None |
| 564 | + |
| 565 | + im = None |
| 566 | + try: |
| 567 | + im, lon_raster, lat_raster, values_raster = projection.draw_hspmap( |
| 568 | + hsp_map, lon_range=extend[0:2], lat_range=extend[2:] |
| 569 | + ) |
| 570 | + except ValueError: |
| 571 | + msg = "No object found in region to draw" |
| 572 | + print(f"{msg}, continuing...") |
| 573 | + # raise ValueError(msg) |
| 574 | + |
| 575 | + projection.draw_milky_way(width=25, linewidth=1.5, color="black", linestyle="-") |
| 576 | + |
| 577 | + # Add colorbar if requested and image was drawn |
| 578 | + if colorbar and im is not None: |
| 579 | + plt.colorbar(im, ax=ax if ax else projection.ax, label=colorbar_label) |
| 580 | + |
| 581 | + if title: |
| 582 | + plt.title(title, pad=5) |
| 583 | + |
| 584 | + if outpath: |
| 585 | + plt.savefig(outpath) |
| 586 | + |
| 587 | + return projection, ax |
| 588 | + |
| 589 | + def plot_region(self, hsp_map, region, projection=None, outpath=None, title=None, colorbar=True, colorbar_label="Coverage depth"): |
| 590 | + """Plot Region. |
| 591 | +
|
| 592 | + Plot catalogue in a predefined region on the sky. |
| 593 | +
|
| 594 | + Parameters |
| 595 | + ---------- |
| 596 | + hsp_map : hsp_HealSparseMap |
| 597 | + input map |
| 598 | + region : dict |
| 599 | + region dictionary with keys 'ra_0', 'extend', 'vmax' |
| 600 | + projection : skyproj.McBrydeSkyproj, optional |
| 601 | + if ``None`` (default), a new plot is created |
| 602 | + outpath : str, optional |
| 603 | + output path, default is ``None`` |
| 604 | + title : str, optional |
| 605 | + print title if not ``None`` (default) |
| 606 | + colorbar : bool, optional |
| 607 | + add colorbar; default is ``True`` |
| 608 | + colorbar_label : str, optional |
| 609 | + colorbar label; default is "Coverage depth" |
| 610 | +
|
| 611 | + Returns |
| 612 | + -------- |
| 613 | + skyproj.McBrydeSkyproj |
| 614 | + projection instance |
| 615 | + plt.axes.Axes |
| 616 | + axes instance |
| 617 | +
|
| 618 | + """ |
| 619 | + return self.plot_area( |
| 620 | + hsp_map, |
| 621 | + region["ra_0"], |
| 622 | + region["extend"], |
| 623 | + region["vmax"], |
| 624 | + projection=projection, |
| 625 | + outpath=outpath, |
| 626 | + title=title, |
| 627 | + colorbar=colorbar, |
| 628 | + colorbar_label=colorbar_label, |
| 629 | + ) |
| 630 | + |
| 631 | + def plot_all_regions(self, hsp_map, outbase=None): |
| 632 | + |
| 633 | + for region in self._regions: |
| 634 | + if outbase: |
| 635 | + outpath = f"{outbase}_{region}.png" |
| 636 | + else: |
| 637 | + outpath = None |
| 638 | + self.plot_region(hsp_map, self._regions[region], outpath=outpath) |
| 639 | + |
| 640 | + @classmethod |
| 641 | + def hp_pixel_centers(cls, nside, nest=False): |
| 642 | + |
| 643 | + # Get number of pixels for given nside |
| 644 | + npix = hp.nside2npix(nside) |
| 645 | + |
| 646 | + # Get pixel indices |
| 647 | + pix_indices = np.arange(npix) |
| 648 | + |
| 649 | + # Get coordinates of pixel centers |
| 650 | + ra, dec = hp.pix2ang(nside, pix_indices, nest=nest, lonlat=True) |
| 651 | + |
| 652 | + return ra, dec, npix |
| 653 | + |
| 654 | + @classmethod |
| 655 | + def plot_footprint_as_hp(cls, hsp_map, nside, outpath=None, title=None): |
| 656 | + |
| 657 | + ra, dec, npix = cls.hp_pixel_centers(nside) |
| 658 | + |
| 659 | + # Create an empty HEALPix map |
| 660 | + m = np.full(npix, np.nan) |
| 661 | + |
| 662 | + fig, ax = plt.subplots(figsize=(10, 10)) |
| 663 | + |
| 664 | + # Plot the HEALPix grid |
| 665 | + hp.mollview(m, title=title, coord="C", notext=True, rot=(180, 0, 0)) |
| 666 | + |
| 667 | + # Define the Galactic Plane: l = [0, 360], b = 0° |
| 668 | + for l0, ls in zip((-5, 0, 5), (":", "-", ":")): |
| 669 | + l_values = np.linspace(0, 360, 500) # 500 points along the plane |
| 670 | + b_values = np.zeros_like(l_values) # Galactic latitude is 0 (the plane) |
| 671 | + |
| 672 | + # Convert (l, b) to (λ, β) - Ecliptic coordinates |
| 673 | + coords = SkyCoord( |
| 674 | + l=l_values * u.degree, b=b_values * u.degree, frame="galactic" |
| 675 | + ) |
| 676 | + ecl_coords = coords.transform_to( |
| 677 | + "barycentrictrueecliptic" |
| 678 | + ) # Ecliptic frame |
| 679 | + |
| 680 | + # Extract Ecliptic longitude (λ) and latitude (β) |
| 681 | + lambda_ecl = ecl_coords.lon.deg # Ecliptic longitude |
| 682 | + beta_ecl = ecl_coords.lat.deg # Ecliptic latitude |
| 683 | + |
| 684 | + # Convert to HEALPix projection coordinates (colatitude, longitude) |
| 685 | + theta = np.radians(90 - beta_ecl) # HEALPix uses colatitude |
| 686 | + phi = np.radians(lambda_ecl) # HEALPix uses longitude |
| 687 | + |
| 688 | + # Create a healpy Mollweide projection in Ecliptic coordinates |
| 689 | + hp.projplot( |
| 690 | + theta, phi, linestyle=ls, color="black", linewidth=1 |
| 691 | + ) # Plot the outline |
| 692 | + |
| 693 | + # Apply mask |
| 694 | + mask_values = hsp_map.get_values_pos(ra, dec, valid_mask=True, lonlat=True) |
| 695 | + |
| 696 | + ok = np.where(mask_values == False)[0] |
| 697 | + # nok = np.where(mask_values == False)[0] |
| 698 | + |
| 699 | + hp.projscatter(ra[ok], dec[ok], lonlat=True, color="green", s=1, marker=".") |
| 700 | + # hp.projscatter(ra[nok], dec[nok], lonlat=True, color="red", s=1, marker=".") |
| 701 | + |
| 702 | + plt.tight_layout() |
| 703 | + |
| 704 | + if outpath: |
| 705 | + plt.savefig(outpath) |
| 706 | + |
| 707 | + plt.show() |
| 708 | + |
| 709 | + |
| 710 | +def hsp_map_logical_or(maps, verbose=False): |
| 711 | + """ |
| 712 | + Hsp Map Logical Or. |
| 713 | +
|
| 714 | + Logical AND of HealSparseMaps. |
| 715 | +
|
| 716 | + """ |
| 717 | + if verbose: |
| 718 | + print("Combine all maps...") |
| 719 | + |
| 720 | + # Ensure consistency in coverage and data type |
| 721 | + nside_coverage = maps[0].nside_coverage |
| 722 | + nside_sparse = maps[0].nside_sparse |
| 723 | + dtype = maps[0].dtype |
| 724 | + |
| 725 | + for m in maps: |
| 726 | + # MKDEBUG TODO: Change nside if possible |
| 727 | + if m.nside_coverage != nside_coverage: |
| 728 | + raise ValueError( |
| 729 | + f"Coverage nside={m.nside_coverage} does not match {nside_coverage}" |
| 730 | + ) |
| 731 | + if m.dtype != dtype: |
| 732 | + raise ValueError(f"Data type {m.dtype} does not match {dtype}") |
| 733 | + |
| 734 | + # Create an empty HealSparse map |
| 735 | + map_comb = hsp.HealSparseMap.make_empty(nside_coverage, nside_sparse, dtype=dtype) |
| 736 | + for idx, m in enumerate(maps): |
| 737 | + map_comb |= m |
| 738 | + |
| 739 | + if verbose: |
| 740 | + valid_pixels = map_comb.valid_pixels |
| 741 | + n_tot = np.sum(valid_pixels) |
| 742 | + n_true = np.count_nonzero(valid_pixels) |
| 743 | + n_false = n_tot - n_true |
| 744 | + print( |
| 745 | + f"after map {idx}: frac_true={n_true / n_tot:g}, frac_false={n_false / n_tot:g}" |
| 746 | + ) |
| 747 | + |
| 748 | + return map_comb |
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