Merge pull request #39 from rstoneback/develop

Name Update

Author: rstoneback

.travis.yml

@@ -16,30 +16,33 @@ before_install:
   - pip install pytest-cov
   - pip install coveralls
   - pip install future
-  # Install version specific packages for 2.7 and 3.5
   - pip install 'pandas<0.25'
-  - pip install xarray
+  - pip install 'xarray<0.15'
+  # Install version specific packages for 2.7 and 3.5
   - pip install matplotlib
   - pip install apexpy
   - pip install numpy
   - pip install pysatCDF >/dev/null
   - cd ..
   - git clone https://github.com/pysat/pysat.git >/dev/null
-  - cd ./pysat
+  - cd ./pysat          # set up data directory
+  - git checkout develop
+  - git pull origin develop
   - python setup.py install >/dev/null
   - cd ..
-  # set up data directory
+
+    # set up data directory
   - mkdir /home/travis/build/pysatData
   - python -c 'import pysat; pysat.utils.set_data_dir("/home/travis/build/pysatData")'
 
 install:
-  # install pysatMagVect
-  - cd ./pysatMagVect
+  # install OMMBV
+  - cd ./OMMBV
   - python setup.py develop
 
 # command to run tests
 script:
-  - nosetests  -vs --with-coverage --cover-package=pysatMagVect
+  - nosetests  -vs --with-coverage --cover-package=OMMBV
 
 after_success:
   - coveralls

MANIFEST.in

@@ -1,4 +1,4 @@
-include pysatMagVect/version.txt
+include OMMBV/version.txt
 include LICENSE
 include CONTRIBUTING.md
-prune pysatMagVect/tests
+prune OMMBV/tests

pysatMagVect/__init__.py OMMBV/__init__.pypysatMagVect/__init__.py renamed to OMMBV/__init__.py

@@ -8,12 +8,12 @@
 on_rtd = os.environ.get('ONREADTHEDOCS') == 'True'
 
 if not on_rtd:
-    from pysatMagVect import igrf
+    from OMMBV import igrf
 else:
     igrf = None
 
-from pysatMagVect import _core
-from pysatMagVect._core import *
-from pysatMagVect import satellite
+from OMMBV import _core
+from OMMBV._core import *
+from OMMBV import satellite
 
 __all__ = []

pysatMagVect/_coords.f OMMBV/_coords.fpysatMagVect/_coords.f renamed to OMMBV/_coords.f

@@ -9,8 +9,8 @@
 import datetime
 import pysat
 # import reference IGRF fortran code within the package
-from pysatMagVect import igrf as igrf
-import pysatMagVect.fortran_coords
+from OMMBV import igrf as igrf
+import OMMBV.fortran_coords
 
 # parameters used to define Earth ellipsoid
 # WGS84 parameters below
@@ -111,7 +111,7 @@ def geodetic_to_ecef(latitude, longitude, altitude):
     return x, y, z
 
 
-ecef_to_geodetic = pysatMagVect.fortran_coords.ecef_to_geodetic
+ecef_to_geodetic = OMMBV.fortran_coords.ecef_to_geodetic
 
 
 def python_ecef_to_geodetic(x, y, z, method=None):

pysatMagVect/_core.py OMMBV/_core.pypysatMagVect/_core.py renamed to OMMBV/_core.py

@@ -1,7 +1,8 @@
-import pysatMagVect as pymv
+import OMMBV as OMMBV
 
 
-def add_mag_drift_unit_vectors_ecef(inst, **kwargs):
+def add_mag_drift_unit_vectors_ecef(inst, lat_label='latitude', long_label='longitude',
+                                    alt_label='altitude', **kwargs):
     """Adds unit vectors expressing the ion drift coordinate system
     organized by the geomagnetic field. Unit vectors are expressed
     in ECEF coordinates.
@@ -10,8 +11,6 @@ def add_mag_drift_unit_vectors_ecef(inst, **kwargs):
     ----------
     inst : pysat.Instrument
         Instrument object that will get unit vectors
-    max_steps : int
-        Maximum number of steps allowed for field line tracing
     **kwargs
         Passed along to calculate_mag_drift_unit_vectors_ecef
 
@@ -27,11 +26,11 @@ def add_mag_drift_unit_vectors_ecef(inst, **kwargs):
     """
 
     # add unit vectors for magnetic drifts in ecef coordinates
-    zvx, zvy, zvz, bx, by, bz, mx, my, mz = pymv.calculate_mag_drift_unit_vectors_ecef(inst['latitude'],
-                                                                                       inst['longitude'],
-                                                                                       inst['altitude'],
-                                                                                       inst.data.index,
-                                                                                       **kwargs)
+    zvx, zvy, zvz, bx, by, bz, mx, my, mz = OMMBV.calculate_mag_drift_unit_vectors_ecef(inst[lat_label],
+                                                                                        inst[long_label],
+                                                                                        inst[alt_label],
+                                                                                        inst.index,
+                                                                                        **kwargs)
 
     inst['unit_zon_ecef_x'] = zvx
     inst['unit_zon_ecef_y'] = zvy
@@ -168,7 +167,8 @@ def add_mag_drift_unit_vectors_ecef(inst, **kwargs):
     return
 
 
-def add_mag_drift_unit_vectors(inst, **kwargs):
+def add_mag_drift_unit_vectors(inst, lat_label='latitude', long_label='longitude',
+                                    alt_label='altitude', **kwargs):
     """Add unit vectors expressing the ion drift coordinate system
     organized by the geomagnetic field. Unit vectors are expressed
     in S/C coordinates.
@@ -198,19 +198,20 @@ def add_mag_drift_unit_vectors(inst, **kwargs):
     """
 
     # vectors are returned in geo/ecef coordinate system
-    add_mag_drift_unit_vectors_ecef(inst, **kwargs)
+    add_mag_drift_unit_vectors_ecef(inst, lat_label=lat_label, long_label=long_label,
+                                    alt_label=alt_label,**kwargs)
     # convert them to S/C using transformation supplied by OA
-    inst['unit_zon_x'], inst['unit_zon_y'], inst['unit_zon_z'] = pymv.project_ecef_vector_onto_basis(
+    inst['unit_zon_x'], inst['unit_zon_y'], inst['unit_zon_z'] = OMMBV.project_ecef_vector_onto_basis(
         inst['unit_zon_ecef_x'], inst['unit_zon_ecef_y'], inst['unit_zon_ecef_z'],
         inst['sc_xhat_x'], inst['sc_xhat_y'], inst['sc_xhat_z'],
         inst['sc_yhat_x'], inst['sc_yhat_y'], inst['sc_yhat_z'],
         inst['sc_zhat_x'], inst['sc_zhat_y'], inst['sc_zhat_z'])
-    inst['unit_fa_x'], inst['unit_fa_y'], inst['unit_fa_z'] = pymv.project_ecef_vector_onto_basis(
+    inst['unit_fa_x'], inst['unit_fa_y'], inst['unit_fa_z'] = OMMBV.project_ecef_vector_onto_basis(
         inst['unit_fa_ecef_x'], inst['unit_fa_ecef_y'], inst['unit_fa_ecef_z'],
         inst['sc_xhat_x'], inst['sc_xhat_y'], inst['sc_xhat_z'],
         inst['sc_yhat_x'], inst['sc_yhat_y'], inst['sc_yhat_z'],
         inst['sc_zhat_x'], inst['sc_zhat_y'], inst['sc_zhat_z'])
-    inst['unit_mer_x'], inst['unit_mer_y'], inst['unit_mer_z'] = pymv.project_ecef_vector_onto_basis(
+    inst['unit_mer_x'], inst['unit_mer_y'], inst['unit_mer_z'] = OMMBV.project_ecef_vector_onto_basis(
         inst['unit_mer_ecef_x'], inst['unit_mer_ecef_y'], inst['unit_mer_ecef_z'],
         inst['sc_xhat_x'], inst['sc_xhat_y'], inst['sc_xhat_z'],
         inst['sc_yhat_x'], inst['sc_yhat_y'], inst['sc_yhat_z'],