ntHash/azure-pipelines.yml at master · BirolLab/ntHash · GitHub

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jobs:

- job: linux
  pool:
    vmImage: 'ubuntu-latest'

  steps:
  - checkout: self

  - script: |
      mkdir -p ~/miniforge3
      curl -L https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh  -o ~/miniforge3/miniforge.sh
      bash ~/miniforge3/miniforge.sh -b -u -p ~/miniforge3
      rm -rf  ~/miniforge3/miniforge.sh
      ~/miniforge3/bin/conda init bash
      ~/miniforge3/bin/conda init zsh
      export CONDA=$(realpath ~/miniforge3/bin)
      echo "##vso[task.prependpath]$CONDA"
    displayName: Install conda

  - script: conda create --yes --quiet --name nthash
    displayName: Create Anaconda environment

  - script: |
      source activate nthash
      conda install --yes -c conda-forge mamba
      mamba install --yes -c conda-forge compilers clang llvm clang-format clang-tools meson ninja openmp
    displayName: Install dependencies

  - script: |
      source activate nthash
      meson setup build && cd build && ninja
    displayName: 'Build the project'

  - script: |
      source activate nthash
      set -o errexit -o pipefail
      cd examples
      g++ kmer_hashing.cpp -std=c++17 -I../include -L../build -lnthash && ./a.out
    displayName: 'Compile example'

  - script: |
      source activate nthash
      cd build && ninja clang-format-check
    displayName: 'Check code format'

  - script: |
      source activate nthash
      cd build && ninja clang-tidy
    displayName: 'Run clang-tidy'

  - script: |
      source activate nthash
      cd build && meson test --print-errorlogs
    displayName: 'Run tests'

- job: macos
  pool:
    vmImage: 'macOS-latest'

  steps:
  - checkout: self
    persistCredentials: true

  - script: |
      mkdir -p ~/miniforge3
      curl -L https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-MacOSX-x86_64.sh  -o ~/miniforge3/miniforge.sh
      bash ~/miniforge3/miniforge.sh -b -u -p ~/miniforge3
      rm -rf  ~/miniforge3/miniforge.sh
      ~/miniforge3/bin/conda init bash
      ~/miniforge3/bin/conda init zsh
      export CONDA=$(realpath ~/miniforge3/bin)
      echo "##vso[task.prependpath]$CONDA"
    displayName: Install conda

  - script: conda create --yes --quiet --name nthash
    displayName: Create Anaconda environment

  - script: |
      source activate nthash
      conda install --yes -c conda-forge mamba
      mamba install --yes -c conda-forge compilers clang llvm clang-format clang-tools meson ninja openmp
    displayName: Install dependencies

  - script: |
      source activate nthash
      meson setup build && cd build && ninja
    displayName: 'Build the project'

  - script: |
      source activate nthash
      set -o errexit -o pipefail
      cd examples
      g++ kmer_hashing.cpp -std=c++17 -I../include -L../build -lnthash && ./a.out
    displayName: 'Compile example'

  - script: |
      source activate nthash
      cd build && ninja clang-format-check
    displayName: 'Check code format'

  - script: |
      source activate nthash
      cd build && ninja clang-tidy
    displayName: 'Run clang-tidy'

  - script: |
      source activate nthash
      cd build && meson test --print-errorlogs
    displayName: 'Run tests'